University of California San Francisco

Publications


Medical Informatics

    Rubin DL, Lewis SE, Mungall CJ, Misra S, Westerfield M, Ashburner M, Sim I, Chute CG, Solbrig H, Storey M, Smith B, Noy NF, and Musen MA. The National Center for Biomedical Ontology: Advancing Biomedicine through Structured Organization of Scientific Knowledge. OMICS: A Journal of Integrative Biology Jun 2006, Vol. 10, No. 2: 185-198

    Berlin A, Sorani M, Sim I. A Taxonomic Description of Computer-Based Clinical Decision Support Systems. Journal of Biomedical Informatics, 2006 Dec; 39(6):656-667.

    Miller R, West C, Martin T, Sim I, Granchoff C. The Value of Electronic Health Records in Solo/Small Group Practices. Health Affairs 2005; 24(5):1127-1137.

    Sim I, Olasov B, Carini S. An Ontology of Randomized Trials for Evidence-Based Medicine: Content Specification and Evaluation Using the Competency Decomposition Method. Journal of Biomedical Informatics 2004; 37(2):108-119.

    Berlin A, Sorani M, Sim I. Characteristics of Outpatient Clinical Decision Support Systems: A Taxonomic Description. Proceedings of MedInfo 2004. IOS Press, Amsterdam. Fieschi M, et al (eds). 2004; 578-81.

    Miller R, Sim I, Newman J. Electronic Medical Records in Solo/Small Groups: A Qualitative Study of Physician User Types. Proceedings of MedInfo 2004. IOS Press, Amsterdam. Fieschi M, et al (eds). 2004; 658-662.

    Cuadros J, Sim I. EyePacs: An Open Source Clinical Communication System for Eye Care. Proceedings of MedInfo 2004. IOS Press, Amsterdam. Fieschi M, et al (eds). 2004; 207-11.

    Sim I, Carini S, Olasov B, Jeng S. Trial Bank Publishing: Phase I Results. Proceedings of MedInfo 2004. IOS Press, Amsterdam. Fieschi M, et al (eds). 2004; 1476-1480.

    Miller RH, Sim I. Using Electronic Medical Records for Quality Improvement in Physician Practices: Barriers and Solutions. Health Affairs, Mar/Apr 2004;  23(12):116-126.

    Sim I, Berlin A. A Framework for Classifying Clinical Decision Support Systems. Proceedings of the American Medical Informatics Association; Musen MA, et al (eds). 2003; 599-603.

    Cuadros J, Adams A, Andriole K, Stemper R, Sim I. Comparison of Image Enhancement Methods for Visual Detection of Glaucomatous Optic Nerve Head Lesions. Proceedings of Computer Assisted Fundus Image Analysis, 2003.

    Sim I, Sanders GD, McDonald KM. Evidence-Based Practice for Mere Mortals: The Role of Informatics and Health Services Research. Journal of General Internal Medicine, 2002; 17(4):302-8. [PubMed]

    Sim I, Gorman P, Greenes RA, Haynes RB, Kaplan B, Lehmann H, Tang PC. Clinical Decision Support Systems for the Practice of Evidence-Based Medicine. Journal of the American Medical Informatics Association, 2001; 8:527-534. [PubMed]

    Sim I, Owens DK, Lavori PW, Rennels GD. Electronic Trial Banks: A Complementary Method for Reporting Randomized Trials. Medical Decision Making, 2000; 20(4):440-450. [PubMed]

    Sim I. Medical Publishing Meets AI. [Invited Paper] IEEE Intelligent Systems1998;13(1).

    Sim I. Trial Banks: An Informatics Foundation for Evidence-Based Medicine. (PhD Dissertation). Section on Medical Informatics, SMI-97-0701/STAN-CS-TR-97-1599, December, 1997. [Abstract][Full text in PDF]

    Sim I and Rennels G. Standardized Reporting of Clinical Trials into Electronic Trial Banks: In Support of Computer-Assisted Evidence-Based Medicine. Section on Medical Informatics, SMI-96-0630, July 1996. [Abstract]

    Sim I and Rennels G. Developing A Clinical Trials Ontology: Comments on Domain Modeling and Ontology Reuse. Section on Medical Informatics, SMI-95-0584, June 1995. [Abstract]

    Sim I and Rennels G. A Trial Bank Model for the Publication of Clinical Trials. Nineteenth Annual Symposium on Computer Applications in Medical Care, New Orleans, LA, 863-867. [Abstract]

    Pratt W and Sim I. Physician's Information Customizer (PIC): Using a Shareable User Model to Filter the Medical Literature. MEDINFO 95 Proceedings, R.A. Greenes et al, eds. p.1447-1451. [Abstract]


Global Trial Registration and Reporting

    Sim I, Detmer D. Beyond Trial Registration: A Global Trial Bank for Clinical Trial Reporting. PLoS Medicine, 2005; 2(11):e365.

    Sim I, Chan AW, Gülmezoglu AM, Evans T, Pang T. Clinical Trial Registration: Transparency is the Watchword. The Lancet 2006; 367(9523): 1631-1633.

    Gülmezoglu AM, Sim I. International Clinical Trial Registration. Any Progress? Wiener Klinische Wochenshrift, 2006 Feb;118(1-2):1-2.

    Krleza-Jeric K, Chan AW, Dickersin K, Sim I, Grimshaw, J, Gluud C. Principles of International Registration of Protocol Information and Results from Human Trials of Health-related Interventions. BMJ 2005; 330:956-958.


Clinical Medicine and Practice

    Sim I, Cummings SR. A New Framework for Describing and Quantifying Gaps Between Proof and Practice. Medical Care, 2003; 41(8):874-881 [see editorial].

    Linder J, Sim I. Antibiotic Treatment of Acute Bronchitis in Smokers: A Systematic Review. Journal of General Internal Medicine, 2002; 17(3):230-4.

    Sim I, and Lavori PW. Meta-analyses and large randomized, controlled trials [letter] New Engl J Med 1998;338(1):61. [PubMed]

    Sim I, McDonald KM, Lavori PW, Norbutas CM, Hlatky MA. Quantitative overview of randomized trials of amiodarone to prevent sudden cardiac death.Circulation 1997;96(9):2823-9. [PubMed]

    Sim I, and Hlatky MA. Growing pains of meta-analysis. [Editorial] BMJ 1996; 313(7059):702. 9386144 [PubMed]

    Sim I, Gupta M, McDonald K, Bourassa MG, and Hlatky MA. A meta-analysis of randomized trials comparing coronary artery bypass grafting with percutaneous transluminal coronary angioplasty in multivessel coronary artery disease. Am J Card 1995; Nov 15, 76(14):1025-9. [PubMed]    


Other

    Burcham TS, Sim I, Bolin LM, and Shooter EM. The NGF complex from the African rat Mastomys natalensis. Neurochemical Research 1991; Jun, 16(6):603-12. [PubMed]

    Frankfurt M, Siegel RA, Sim I, and Wuttke W. Estrous cycle variations in cholecystokinin and substance P concentrations in discrete areas of the rat brain. Neuroendocrinology 1986; 42(3):226-31. [PubMed]

    Frankfurt M, Siegel RA, Sim I, and Wuttke W. Cholecystokinin and substance P concentrations in discrete areas of the rat brain: sex differences. Brain Research 1985; Dec 9, 358(1-2):53-8. [PubMed]

    Lepock JR, Cheng KH, Al-Qysi H, Sim I, Koch CJ, and Kruuv J. Hyperthermia-induced inhibition of respiration and mitochondrial protein denaturation in CHL cells. International Journal of Hyperthermia 1987; Mar-Apr, 3(2):123-32. [PubMed]    


Jump to... [Ida's Home Page] [DGIM Home Page] [BMI Home Page]


Last updated on 09-Mar-02. Copyright 2002, UC Board of Regents.